miRBase entry: mtr-MIR5208d

Stem-loop mtr-MIR5208d


Accession
MI0018418
Description
Medicago truncatula mtr-MIR5208d precursor miRNA
Gene family
MIPF0001326; MIR5208


Sequence

gaauauaguCAUAUUAGUCAUAUUUGUAGGCAUaaguauuuugccguuuuaugcuauuaacauggaugaugugaguuuguuca
(((((.(.((((((((.((((.((.((((.((((((...........)))))))))).)).)))).)))))))).).))))).

Structure
-     u g        G    A  U    G      uauu 
 gaaua a uCAUAUUA UCAU UU GUAG CAUaag    u
 ||||| | |||||||| |||| || |||| ||||||    u
 cuugu u aguguagu ggua aa uauc guauuu    g
a     u g        a    c  u    -      ugcc 


Annotation confidence Not enough data
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Genome context
chr5: 25584157-25584239 [-]

Database links

Mature mtr-miR5208d

Accession MIMAT0021315
Description Medicago truncatula mtr-miR5208d mature miRNA
Sequence 10 - CAUAUUAGUCAUAUUUGUAGGCAU - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010