miRBase entry: mtr-MIR5272f

Stem-loop mtr-MIR5272f


Accession
MI0018410
Description
Medicago truncatula mtr-MIR5272f precursor miRNA
Gene family
MIPF0001278; MIR5272


Sequence

aauugauuuugguuaaaagugaguuggauguGAAUUGAUUAUGUUUGGAUACACUuauuuaaaagugguuggauaagccuuuuaauugauuuugaacauuaaaugaccaacuuacccuuuuaauugua
..........(((((((((((((((((((((((((((((((.(((((....(((((......)))))......)))))....))))))))))...)))).......)))))))))..))))))))...

Structure
aauugauuuu        --         -------    ---          ---U     --GAUA     au 
          gguuaaaa  gugaguugg       augu   GAAUUGAUUA    GUUUG      CACUu  u
          ||||||||  |||||||||       ||||   ||||||||||    |||||      |||||   
          uuaauuuu  cauucaacc       uaca   uuuaguuaau    cgaau      gugaa  u
-------aug        cc         aguaaau    agu          uuuc     agguug     aa 


Annotation confidence Not enough data
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Genome context
AC159090.17: 101796-101923 [-]

Database links

Mature mtr-miR5272f

Accession MIMAT0021307
Description Medicago truncatula mtr-miR5272f mature miRNA
Sequence 32 - GAAUUGAUUAUGUUUGGAUACACU - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010