Stem-loop mtr-MIR5272e

Accession

MI0018409

Description

Medicago truncatula mtr-MIR5272e precursor miRNA

Gene family

MIPF0001278; MIR5272

Sequence

uuugagguGAAUUGAUUUAUGUUUGGAUACACuuucuuacaagugauucuuaugaauugauguuguuugaauag
((((((....(((((((((((...((((.(((((......))))))))).)))))))))))....))))))...

Structure

---      guGA           UUU    A     uc 
   uuugag    AUUGAUUUAUG   GGAU CACuu  u
   ||||||    |||||||||||   |||| |||||   
   aaguuu    uaguuaaguau   cuua gugaa  u
gau      guug           --u    -     ca 

Annotation confidence Not enough data

Genome context

chr7: 30578101-30578174 [+]

Mature mtr-miR5272e

• Accession: MIMAT0021306
• Description: Medicago truncatula mtr-miR5272e mature miRNA
• Sequence: 9 - GAAUUGAUUUAUGUUUGGAUACAC - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010