Stem-loop mtr-MIR5272a

Accession

MI0018405

Description

Medicago truncatula mtr-MIR5272a precursor miRNA

Gene family

MIPF0001278; MIR5272

Sequence

uuggauguGAAUUGAUUUAUGUUUGGAUACACuuauuuaaaagugauucauaugaguugauguuguuuggauagu
((.((.....(((((((((((..(((((.(((((......))))))))))))))))))))).....)).))....

Structure

----  g  uguGA           UU     A     au 
    uu ga     AUUGAUUUAUG  UGGAU CACuu  u
    || ||     |||||||||||  ||||| |||||   
    ag uu     uaguugaguau  acuua gugaa  u
ugau  g  uguug           --     -     aa 

Annotation confidence Not enough data

Genome context

chr2: 8872779-8872853 [+]

Mature mtr-miR5272a

• Accession: MIMAT0021302
• Description: Medicago truncatula mtr-miR5272a mature miRNA
• Sequence: 9 - GAAUUGAUUUAUGUUUGGAUACAC - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010