miRBase entry: mtr-MIR5241b

Stem-loop mtr-MIR5241b


Accession
MI0018341
Description
Medicago truncatula mtr-MIR5241b precursor miRNA
Gene family
MIPF0001290; MIR5241

Literature search
1 open access papers mention mtr-MIR5241b
(1 sentences)

Sequence

auuaaaguauugggcucauuuuuguucggucguaaugUGACUGAAUGGAAGAGUGCAUuggcuaaau
.....(((..((.((((..(((((((((((((.....))))))))))))))))).))...)))....

Structure
auuaa   -au  g    au             u 
     agu   ug gcuc  uuuuguucggucg a
     |||   || ||||  ||||||||||||| a
     ucg   AC UGAG  AAGGUAAGUCAGU u
-uaaa   guU  G    --             g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr6: 21088246-21088312 [-]

Database links

Mature mtr-miR5241b

Accession MIMAT0021236
Description Medicago truncatula mtr-miR5241b mature miRNA
Sequence 38 - UGACUGAAUGGAAGAGUGCAU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010