miRBase entry: mtr-MIR2592bj

Stem-loop mtr-MIR2592bj


Accession
MI0018335
Description
Medicago truncatula mtr-MIR2592bj precursor miRNA
Gene family
MIPF0000815; MIR2592

Literature search
1 open access papers mention mtr-MIR2592bj
(2 sentences)

Sequence

ccaauauuugaccggaauucccacuguuccugucaaaagauuaaauucuuguuaggcugauuuaaaugaagguauugaagugucaaggaauggaccucauucuuuucacauuugaauaccaucauuuaaucccaaccuaacaagaauuuaaucuuuugaaUGGAACAUUGGGAAUGCCGGUcgaauauugg
(((((((((((((((.(((((((.((((((..((((((((((((((((((((((((.((..((((((((.((((((.((((((.((((((((.....))))))))..)))))).)))))).))))))))...)).))))))))))))))))))))))))..)))))).))))))).)))))))))))))))

Structure
               a       c      ug                        c  -au        a      g      -c        g 
ccaauauuugaccgg auuccca uguucc  ucaaaagauuaaauucuuguuagg ug   uuaaauga gguauu aagugu  aaggaaug a
||||||||||||||| ||||||| ||||||  |||||||||||||||||||||||| ||   |||||||| |||||| ||||||  |||||||| c
gguuauaagcUGGCC UAAGGGU ACAAGG  aguuuucuaauuuaagaacaaucc ac   aauuuacu ccauaa uuuaca  uuucuuac c
               G       U      Ua                        a  ccu        a      g      cu        u 


Annotation confidence Not enough data
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Genome context
chr2: 32404919-32405109 [+]

Database links

Mature mtr-miR2592bj

Accession MIMAT0021230
Description Medicago truncatula mtr-miR2592bj mature miRNA
Sequence 161 - UGGAACAUUGGGAAUGCCGGU - 181
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010