Stem-loop mtr-MIR2592ax

Accession

MI0018301

Description

Medicago truncatula mtr-MIR2592ax precursor miRNA

Gene family

MIPF0000815; MIR2592

Literature search

1 open access papers mention mtr-MIR2592ax
(2 sentences)

Sequence

aauucuuguuAGGCUGGUUUAGAUGAAGGUAuuaagugacaaggaaugaaccucauuucguuggaacuugaauaccaucaucuaaagcaaacccaacaaaaga
.....(((((.((.((.(((((((((.((((((((((..((((((((((...))))))).)))..))))).))))).))))))))).))..)).)))))....

Structure

aauuc     A  -C  G         A     -     ga   -       a 
     uuguu GG  UG UUUAGAUGA GGUAu uaagu  caa ggaauga  
     ||||| ||  || ||||||||| ||||| |||||  ||| ||||||| c
     aacaa cc  ac aaaucuacu ccaua guuca  guu cuuuacu  
-agaa     c  aa  g         a     a     ag   g       c 

Annotation confidence Not enough data

Genome context

chr2: 30989449-30989551 [-]

Mature mtr-miR2592ax

• Accession: MIMAT0021195
• Description: Medicago truncatula mtr-miR2592ax mature miRNA
• Sequence: 11 - AGGCUGGUUUAGAUGAAGGUA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010