Stem-loop mtr-MIR2592aw

Accession

MI0018300

Description

Medicago truncatula mtr-MIR2592aw precursor miRNA

Gene family

MIPF0000815; MIR2592

Literature search

1 open access papers mention mtr-MIR2592aw
(2 sentences)

Sequence

accugccaaacaacaggacucgagcauuucgcucggcauucauguuuuuccuuugaaaagauuaaauucuuguuAGGCUGGUUUAGAUGAAGGUAuuaggcgugaaggaaugaaccucauuucguuggcacuugaauaccaacgucuaaagcacgccuaacaaaaauuuauucuuuucaaaggaaaacaugaaugccgggugaaaugcuugagcccuauuguuuugcagguuu
((((((.((((((.(((.((((((((((((((((((((((((((((((.((((((((((((.((((((.(((((((((((.((((((((..(((((((((.((.(((((((((...))))))).)).)).)))).)))))..)))))))).)).))))))))).)))))).)))))))))))))))))))))))))))))))))))))))))).))).)))))).))))))..

Structure

--      c      c   a                              u            u      c         -  G        AA     -    c  g  -       a 
  accugc aaacaa agg cucgagcauuucgcucggcauucauguuuu ccuuugaaaaga uaaauu uuguuAGGC UG UUUAGAUG  GGUAu uagg gu aa ggaauga  
  |||||| |||||| ||| |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| || ||||||||  ||||| |||| || || ||||||| c
  uggacg uuuguu ucc gaguucguaaagugggccguaaguacaaaa ggaaacuuuucu auuuaa aacaauccg ac aaaucugc  ccaua guuc cg uu cuuuacu  
uu      u      a   c                              -            u      a         c  g        aa     a    a  g  g       c 

Annotation confidence Not enough data

Genome context

AC225526.13: 51752-51984 [+]

Mature mtr-miR2592aw

• Accession: MIMAT0021194
• Description: Medicago truncatula mtr-miR2592aw mature miRNA
• Sequence: 75 - AGGCUGGUUUAGAUGAAGGUA - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010