Stem-loop mtr-MIR5219

Accession

MI0018283

Description

Medicago truncatula mtr-MIR5219 precursor miRNA

Sequence

cgacauuuguuguaccggcagagauuuuuccggcuaggcuaaggucuaccugUCAUGGAAUCUCAGCUGCUGCAggaaaggcag
.....(((.(((((.((((.((((((((..(((.(((((....))))).)))....)))))))).)))).))))).))).....

Structure

cgaca   g     c    a        --uc   c     u 
     uuu uugua cggc gagauuuu    cgg uaggc a
     ||| ||||| |||| ||||||||    ||| |||||  
     aaa gACGU GUCG CUCUAAGG    guc aucug a
gacgg   g     C    A        UACU   c     g 

Annotation confidence Not enough data

Genome context

chr1: 12460968-12461051 [+]

Mature mtr-miR5219

• Accession: MIMAT0021177
• Description: Medicago truncatula mtr-miR5219 mature miRNA
• Sequence: 53 - UCAUGGAAUCUCAGCUGCUGCA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010