miRBase entry: mtr-MIR5207

Stem-loop mtr-MIR5207


Accession
MI0018245
Description
Medicago truncatula mtr-MIR5207 precursor miRNA


Sequence

uuugaaagagagcCAUUAAUGUGGGUUUGGACGGUUacuaccacuaacacguuuucauugaauguauuaaugaucuaugacuuguuuuaggcuauaaauaggcuuucaucuucaac
.(((((.((((((((((..(((((.((.(((((((((....((.(((.((((((.....)))))).))).)).....)))).))))).)).)))))))).)))))))...))))).

Structure
u     --a       -   AA     G  U     -    -cuac  c   c      u 
 uugaa   gagagcC AUU  UGUGG UU GGACG GUUa     ca uaa acguuu c
 |||||   ||||||| |||  ||||| || ||||| ||||     || ||| |||||| a
 aacuu   cuuucgg uaa  auauc ga uuugu cagu     gu auu uguaag u
c     cua       a   --     g  u     u    aucua  a   a      u 


Annotation confidence Not enough data
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Genome context
chr1: 23213177-23213292 [-]

Database links

Mature mtr-miR5207

Accession MIMAT0021138
Description Medicago truncatula mtr-miR5207 mature miRNA
Sequence 14 - CAUUAAUGUGGGUUUGGACGGUU - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010