Stem-loop sequence bdi-MIR5180a

AccessionMI0018153 (change log)
DescriptionBrachypodium distachyon miR5180a stem-loop
Gene family MIPF0001200; MIR5067
Literature search

2 open access papers mention bdi-MIR5180a
(2 sentences)

Stem-loop 
   -uuagugaaaaccuauaacua     c                      u             ag cua 
5'                      cuacu ccucugauccaaaauaaguguc caguuuugaacua  c   g
                        ||||| |||||||||||||||||||||| |||||||||||||  |   u
3'                      gauga ggagacuagguuuuauucacag gucaaaacuugau  g   u
   ucguucguguauacgucaaua     u                      c             cu aac
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Bd21; GCA_000005505.1) Overlapping transcripts
3: 56704432-56704571 [+]
intergenic
Database links

Mature sequence bdi-miR5180a

Accession MIMAT0020729
Sequence

41 -  

uaagugucucaguuuugaacu

 - 61

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Evidence not experimental

References

1
PMID:21371551 "Implementation of a de novo genome-wide computational approach for updating Brachypodium miRNAs" Baev V, Milev I, Naydenov M, Apostolova E, Minkov G, Minkov I, Yahubyan G Genomics. 97:282-293(2011).