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miRBase |
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Stem-loop sequence bdi-MIR169c |
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Accession | MI0018126 (change log) | ||||
Description | Brachypodium distachyon miR169c stem-loop | ||||
Gene family | MIPF0000037; MIR169_2 | ||||
Literature search |
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3 open access papers mention bdi-MIR169c | ||||
Stem-loop |
-uu u a c -g a c ug ccugguguugggggaauug 5' gcca acgcua gagg agagaa ggg ug agccaagga acuugccggcu c |||| |||||| |||| |||||| ||| || ||||||||| ||||||||||| a 3' cggu uguggu cuuc ucucuu ucc ac ucgguuccu uggacggccga g ucc u - u ga - a gu uugaguuccgaguuguuuc |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence bdi-miR169c-5p |
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Accession | MIMAT0020701 |
Sequence |
33 - cagccaaggaugacuugccgg - 53 |
Evidence | experimental; Illumina [2] |
Mature sequence bdi-miR169c-3p |
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Accession | MIMAT0027073 |
Sequence |
101 - ggcagguuguccuuggcuac - 120 |
Evidence | experimental; Illumina [2] |
References |
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1 |
PMID:21371551
"Implementation of a de novo genome-wide computational approach for updating Brachypodium miRNAs"
Genomics. 97:282-293(2011).
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2 |
PMID:23264558
"Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon"
Mol Plant. 6:423-443(2013).
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