Stem-loop sequence bdi-MIR171d

AccessionMI0018090 (change log)
DescriptionBrachypodium distachyon miR171d stem-loop
Gene family MIPF0000030; MIR171_1
Literature search

1 open access papers mention bdi-MIR171d
(2 sentences)

Stem-loop 
   gcugaggcaaggga   -      u   c    u         u  a    c     c     cg    --    gau   u 
5'               aug augaaa ggc acua gauguuggc cg cuca ucaga gacac  gccg  gagc   gcg g
                 ||| |||||| ||| |||| ||||||||| || |||| ||||| |||||  ||||  ||||   |||  
3'               uac uacuuu ucg ugau cuauaaccg gc gagu agucu uugug  cggc  cucg   cgu c
   --uucuaucgaaga   g      c   -    u         u  c    u     -     --    ag    -au   g
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Confidence Annotation confidence: not enough data
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Database links

Mature sequence bdi-miR171d-5p

Accession MIMAT0027047
Sequence

36 -  

uguuggcucgacucacucaga

 - 56

Get sequence
Evidence experimental; Illumina [2]

Mature sequence bdi-miR171d-3p

Accession MIMAT0020665
Sequence

105 -  

ugauugagccgugccaauauc

 - 125

Get sequence
Evidence experimental; Illumina [2]

References

1
PMID:21371551 "Implementation of a de novo genome-wide computational approach for updating Brachypodium miRNAs" Baev V, Milev I, Naydenov M, Apostolova E, Minkov G, Minkov I, Yahubyan G Genomics. 97:282-293(2011).
2
PMID:23264558 "Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon" Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E Mol Plant. 6:423-443(2013).