Stem-loop sequence mmu-mir-5135

Accession

MI0018047 (change log)

Symbol

MGI:Mir5135

Description

Mus musculus miR-5135 stem-loop

Stem-loop

   gag      c   -    -a             -------  c 
5'    aggacu gga gccc  gccaccuagacuu       uc c
      |||||| ||| ||||  |||||||||||||       ||  
3'    uccugg ccu cggg  cgguggaucugga       ag a
   uca      u   g    aa             cgcgaag  g 

Deep sequencing

43 reads, 0 reads per million, 16 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr12: 76533134-76533212 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir5135
• MGI:Mir5135
• RNAcentral:URS000075CD9D_10090
• miRBase Tracker:MI0018047

Mature sequence mmu-miR-5135

• Accession: MIMAT0020646
• Sequence: 47 - aggucuagguggcaagggcguccu - 70
• Deep sequencing: 32 reads, 9 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS0000453E9F_10090
• Predicted targets:
  • TargetScanVert:mmu-miR-5135
  • miRDB:mmu-miR-5135

References

1. PMID:21403133 "Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage" Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S Blood. 117:5340-5349(2011).