Stem-loop sequence mmu-mir-5133

Accession

MI0018045 (change log)

Symbol

MGI:Mir5133

Description

Mus musculus miR-5133 stem-loop

Stem-loop

   c   ga    ----       -u       ---   --a   c 
5'  gcc  gagg    cuggagc  gcggcag   cgc   ggc u
    |||  ||||    |||||||  |||||||   |||   |||  
3'  cgg  cucc    gacuucg  cgccguc   gug   ccg g
   -   ga    uuuu       cu       ucu   ccg   g 

Deep sequencing

232 reads, 0 reads per million, 58 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr9: 62122518-62122594 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir5133
• MGI:Mir5133
• RNAcentral:URS000075B541_10090
• miRBase Tracker:MI0018045

Mature sequence mmu-miR-5133

• Accession: MIMAT0020644
• Sequence: 10 - gcuggagcugcggcagcgcag - 30
• Deep sequencing: 182 reads, 49 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS0000194954_10090
• Predicted targets:
  • TargetScanVert:mmu-miR-5133
  • miRDB:mmu-miR-5133

References

1. PMID:21403133 "Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage" Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S Blood. 117:5340-5349(2011).