Stem-loop sequence mmu-mir-5127

Accession

MI0018039 (change log)

Symbol

MGI:Mir5127

Description

Mus musculus miR-5127 stem-loop

Stem-loop

   g        a     u    ---ug   u  cau   g 
5'  cuuucucu cuugg gaaa     ugg ga   aug u
    |||||||| ||||| ||||     ||| ||   |||  
3'  gggagaga ggacc cuuu     acc cu   uac g
   -        -     -    uccca   -  cuu   a 

Deep sequencing

1143 reads, 0 reads per million, 54 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr18: 81992010-81992080 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir5127
• MGI:Mir5127
• miRBase Tracker:MI0018039

Mature sequence mmu-miR-5127

• Accession: MIMAT0020638
• Sequence: 43 - ucucccaacccuuuuccca - 61
• Deep sequencing: 1091 reads, 52 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-5127
  • miRDB:mmu-miR-5127

References

1. PMID:21403133 "Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage" Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S Blood. 117:5340-5349(2011).