Stem-loop sequence mmu-mir-5125

Accession

MI0018036 (change log)

Symbol

MGI:Mir5125

Description

Mus musculus miR-5125 stem-loop

Stem-loop

   -    uu    u u       gc    u  cuuu   cau 
5'  cgcc  gcag c aaggaga  ccca gc    gga   g
    ||||  |||| | |||||||  |||| ||    |||    
3'  gugg  cguc g uuccuuu  gggu cg    ccu   c
   a    uc    u -       -a    c  ucuu   ugu 

Deep sequencing

35 reads, 0 reads per million, 26 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr17: 23823291-23823369 [+]
• Overlapping transcripts:

  sense

  ENSMUST00000088621 ; Srrm2-201; intron 11

Database links

• EntrezGene:Mir5125
• MGI:Mir5125
• miRBase Tracker:MI0018036

Mature sequence mmu-miR-5125

• Accession: MIMAT0020635
• Sequence: 49 - ucugccugggauuuccuugu - 68
• Deep sequencing: 9 reads, 8 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-5125
  • miRDB:mmu-miR-5125

References

1. PMID:21403133 "Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage" Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S Blood. 117:5340-5349(2011).