miRBase entry: mmu-mir-5121

Stem-loop mmu-mir-5121


Accession
MI0018030
Symbol
MGI: Mir5121
Description
Mus musculus mmu-mir-5121 precursor miRNA

Literature search
1 open access papers mention mmu-mir-5121
(1 sentences)

Sequence

919 reads, 39 reads per million, 72 experiments
ggugaguuggugauguggugacauguaggacaggguaggcucuggcAGCUUGUGAUGAGACAUCUCCcacucau
.((((((.((.(((((.((.(((.((..(.(((((....))))).).)).))).))...))))).)).))))))

Structure
g      u  u     --g  g   u  ag a     u 
 gugagu gg gaugu   gu aca gu  g caggg a
 |||||| || |||||   || ||| ||  | |||||  
 uacuca CC CUACA   UA UGU CG  c gucuc g
-      c  U     GAG  G   U  -A g     g 


Annotation confidence Not enough data
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Genome context
chr7: 45126918-45126991 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-5121
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-5121

Accession MIMAT0020629
Description Mus musculus mmu-miR-5121 mature miRNA
Sequence 47 - AGCUUGUGAUGAGACAUCUCC - 67
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 21403133
    Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage
    "Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S"
    "Blood (2011) 117:5340-5349