Dead miRNA entry

miRNA accession:
MI0018026
miRNA ID:
mmu-mir-5117
Comment:
The abundance of reads mapping to the miR-5117 sequence has been shown to be independent of Dicer and DGCR8, and the sequences are not found in Ago2 IP experiments (Castellano and Stebbing, NAR 2013, PMID:23325850). It is therefore likely a misannotation.

Previous miRNA entry

Stem-loop sequence mmu-mir-5117

AccessionMI0018026 (change log)
Symbol MGI:Mir5117
DescriptionMus musculus miR-5117 stem-loop
Stem-loop 
   -         --    --  ug      --aa    --aaa    u     
5'  agguacugu  uagu  ga  aucaau    aguu     caga ggga 
    |||||||||  ||||  ||  ||||||    ||||     |||| ||| a
3'  uuuaugaca  gucg  uu  uaguua    uuag     gucu cucu 
   a         aa    aa  gu      gaag    aauaa    -
Get sequence
Deep sequencing
15342 reads, 30 reads per million, 100 experiments
Confidence Annotation confidence: not enough data
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Database links

Mature sequence mmu-miR-5117

Accession MIMAT0020625
Sequence

8 -  

uguuagugaugaucaauaaaguu

 - 30

Get sequence
Deep sequencing1979 reads, 83 experiments
Evidence experimental;

References

1
PMID:21403133 "Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage" Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S Blood. 117:5340-5349(2011).