Stem-loop sequence mmu-mir-5113

Accession

MI0018022 (change log)

Symbol

MGI:Mir5113

Description

Mus musculus miR-5113 stem-loop

Stem-loop

   -      u   -ac        a   a       uuuaacuc 
5'  uaggga ggg   agaggagg gag gauccug        a
    |||||| |||   |||||||| ||| |||||||         
3'  gucccu cuc   ucuccucc cuc cugggac        c
   g      -   guc        -   a       cacaacgu 

Deep sequencing

4219 reads, 6.25 reads per million, 80 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr15: 80940039-80940120 [+]
• Overlapping transcripts:

  sense

  ENSMUST00000067689 ; Tnrc6b-201; exon 25

Database links

• EntrezGene:Mir5113
• MGI:Mir5113
• RNAcentral:URS000075C68C_10090
• miRBase Tracker:MI0018022

Mature sequence mmu-miR-5113

• Accession: MIMAT0020621
• Sequence: 11 - acagaggaggagagagauccugu - 33
• Deep sequencing: 4191 reads, 77 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS00001F3997_10090
• Predicted targets:
  • TargetScanVert:mmu-miR-5113
  • miRDB:mmu-miR-5113

References

1. PMID:21403133 "Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage" Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S Blood. 117:5340-5349(2011).