Stem-loop sequence mmu-mir-5112

Accession

MI0018021 (change log)

Symbol

MGI:Mir5112

Description

Mus musculus miR-5112 stem-loop

Literature search

4 open access papers mention mmu-mir-5112
(7 sentences)

Stem-loop

   --g       -       ca c    --    a 
5'    gcugggg uguagcu  g ggga  gagc c
      ||||||| |||||||  | ||||  ||||  
3'    ugaccuu acaucga  c cccu  uucg c
   ccg       u       -- -    ac    u 

Deep sequencing

1207 reads, 1.64 reads per million, 61 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr18: 82720281-82720340 [+]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir5112
• MGI:Mir5112
• miRBase Tracker:MI0018021

Mature sequence mmu-miR-5112

• Accession: MIMAT0020620
• Sequence: 11 - uagcucagcgggagagcac - 29
• Deep sequencing: 1065 reads, 66 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-5112
  • miRDB:mmu-miR-5112

References

1. PMID:21403133 "Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage" Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S Blood. 117:5340-5349(2011).