Dead miRNA entry

miRNA accession:
MI0018018
miRNA ID:
mmu-mir-5109
Comment:
The annotated miR-5109 sequence has been shown to derive from a fragment of LSU rRNA (Castellano and Stebbing, NAR 2013, PMID:23325850) and is removed from the database.

Previous miRNA entry

Stem-loop sequence mmu-mir-5109

AccessionMI0018018 (change log)
Symbol MGI:Mir5109
DescriptionMus musculus miR-5109 stem-loop
Stem-loop 
   g    ug ug  -   cuu    gug     g   a  ccua    acu 
5'  gguu  g  gu gga   uucc   ccugg cug ca    gcag   u
    ||||  |  || |||   ||||   ||||| ||| ||    ||||    
3'  uuaa  u  ca ccu   aagg   ggacc ggc gu    uguc   a
   -    uu gu  g   ---    ---     a   -  ----    aag
Get sequence
Deep sequencing
95998 reads, 129 reads per million, 107 experiments
Confidence Annotation confidence: not enough data
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Database links

Mature sequence mmu-miR-5109

Accession MIMAT0020617
Sequence

55 -  

cuguugcggaccaggggaauccg

 - 77

Get sequence
Deep sequencing85606 reads, 106 experiments
Evidence experimental;

References

1
PMID:21403133 "Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage" Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S Blood. 117:5340-5349(2011).