miRBase entry: mmu-mir-5107

Stem-loop mmu-mir-5107


Accession
MI0018016
Symbol
MGI: Mir5107
Description
Mus musculus mmu-mir-5107 precursor miRNA

Literature search
3 open access papers mention mmu-mir-5107
(6 sentences)

Sequence

5213 reads, 73 reads per million, 40 experiments
uccaagauguUGGGCAGAGGAGGCAGGGACAacaaacugguggcccagcuguauCAACCUGUGCUUCUCUUCCCAGucacccugugaa
((((.(.(((((((.((((((((((((....(((..((((....)))).))).....))))).))))))).))))).)).).)).)).

Structure
-  -  a a  -     C       -     -GACA   aa    u 
 uc ca g ug uUGGG AGAGGAG GCAGG     aca  cugg g
 || || | || ||||| ||||||| |||||     |||  ||||  
 ag gu c ac GACCC UCUCUUC UGUCC     ugu  gacc g
a  u  c c  u     U       G     AACua   -c    c 


Annotation confidence High
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Genome context
chr18: 60812076-60812163 [+]

Database links

Mature mmu-miR-5107-5p

Accession MIMAT0020615
Description Mus musculus mmu-miR-5107-5p mature miRNA
Sequence 11 - UGGGCAGAGGAGGCAGGGACA - 31
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mmu-miR-5107-3p

Accession MIMAT0022985
Description Mus musculus mmu-miR-5107-3p mature miRNA
Sequence 55 - CAACCUGUGCUUCUCUUCCCAG - 76
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 21403133
    Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage
    "Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S"
    "Blood (2011) 117:5340-5349