Stem-loop sequence mmu-mir-5104

Accession

MI0018012 (change log)

Symbol

MGI:Mir5104

Description

Mus musculus miR-5104 stem-loop

Stem-loop

   -      aaa       g      u     uc     agcac    u 
5'  gcucuu   uguugag caucuc cuagc  cagag     gguu u
    ||||||   ||||||| |||||| |||||  |||||     ||||  
3'  cgggaa   acgacuc guggag gaucg  gucuu     ccaa a
   a      gga       g      u     -u     guuaa    u 

Deep sequencing

415 reads, 0 reads per million, 53 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr10: 7836381-7836474 [+]
• Overlapping transcripts:

  sense

  ENSMUST00000039484 ; Zc3h12d-201; intron 1

Database links

• EntrezGene:Mir5104
• MGI:Mir5104
• RNAcentral:URS000075B803_10090
• miRBase Tracker:MI0018012

Mature sequence mmu-miR-5104

• Accession: MIMAT0020611
• Sequence: 61 - cugugcuagugagguggcucagca - 84
• Deep sequencing: 344 reads, 37 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS00003402EE_10090
• Predicted targets:
  • TargetScanVert:mmu-miR-5104
  • miRDB:mmu-miR-5104

References

1. PMID:21403133 "Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage" Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S Blood. 117:5340-5349(2011).