Stem-loop sequence ssc-mir-2320

AccessionMI0017997 (change log)
DescriptionSus scrofa miR-2320 stem-loop
Gene family MIPF0001253; mir-2320
Literature search

5 open access papers mention ssc-mir-2320
(15 sentences)

Stem-loop 
   --   gu     u         u   gc        guaau 
5'   gcu  cccca ggcacaggg cca  ugucggcu     a
     |||  ||||| ||||||||| |||  ||||||||     c
3'   cga  ggggu uuguguccc ggu  guagcugg     c
   ca   gc     -         u   -a        guagc
Get sequence
Deep sequencing
775 reads, 73.3 reads per million, 15 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Sscrofa10.2; GCA_000003025.4) Overlapping transcripts
chr6: 60147823-60147903 [-]
sense
ENSSSCT00000003731 ; CEP104-201; intron 2
Database links

Mature sequence ssc-miR-2320-5p

Accession MIMAT0020597
Previous IDsssc-miR-2320
Sequence

11 -  

uggcacaggguccagcugucgg

 - 32

Get sequence
Deep sequencing748 reads, 15 experiments
Evidence experimental; Illumina [1-3]

Mature sequence ssc-miR-2320-3p

Accession MIMAT0020598
Previous IDsssc-miR-2320*
Sequence

51 -  

cgaugauggucccuguguuug

 - 71

Get sequence
Deep sequencing26 reads, 8 experiments
Evidence experimental; Illumina [1-3]

References

1
PMID:21312241 "MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing" Li G, Li Y, Li X, Ning X, Li M, Yang G J Cell Biochem. 112:1318-1328(2011).
2
PMID:22953717 "Profiling microRNAs in lung tissue from pigs infected with Actinobacillus pleuropneumoniae" Podolska A, Anthon C, Bak M, Tommerup N, Skovgaard K, Heegaard PM, Gorodkin J, Cirera S, Fredholm M BMC Genomics. 13:459(2012).
3
PMID:24499489 "Exploration of microRNAs in porcine milk exosomes" Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL BMC Genomics. 15:100(2014).