miRBase entry: ssc-mir-491

Stem-loop ssc-mir-491


Accession
MI0017993
Description
Sus scrofa ssc-mir-491 precursor miRNA
Gene family
MIPF0000319; mir-491

Literature search
5 open access papers mention ssc-mir-491
(6 sentences)

Sequence

25 reads, 25 reads per million, 6 experiments
uuagcuggguAGUGGGGAACCCUUCCAUGAGGaguagaacacuccuuaugcaagauucccuucuaccugacugggu
((((.(((((((.((((((..(((.((((((((((.....)))))))))).))).)))))).))))))).))))..

Structure
--    c       U      CC   C          a 
  uuag uggguAG GGGGAA  CUU CAUGAGGagu g
  |||| ||||||| ||||||  ||| |||||||||| a
  gguc guccauc ucccuu  gaa guauuccuca a
ug    a       u      -a   c          c 


Annotation confidence Not enough data
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Genome context
chr1: 225810907-225810982 [-]

Database links

Mature ssc-miR-491

Accession MIMAT0020592
Description Sus scrofa ssc-miR-491 mature miRNA
Sequence 11 - AGUGGGGAACCCUUCCAUGAGG - 32
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328

  2. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100