Stem-loop sequence ssc-mir-218b

AccessionMI0017989 (change log)
DescriptionSus scrofa miR-218b stem-loop
Gene family MIPF0000026; mir-218
Literature search

8 open access papers mention ssc-mir-218b
(34 sentences)

Stem-loop 
   -  -       uuu         cu        gguggaacga  g 
5'  gg gcuuucc   gugcuugau  aaccaugu          ug a
    || |||||||   |||||||||  ||||||||          ||  
3'  cc cgaaagg   cacgaacug  uugguaca          gc a
   g  u       cgc         uc        --------ag  a
Get sequence
Deep sequencing
141 reads, 0 reads per million, 13 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Sscrofa10.2; GCA_000003025.4) Overlapping transcripts
chr16: 59686628-59686711 [+]
sense
ENSSSCT00000018524 ; SLIT3-201; intron 8
Database links

Mature sequence ssc-miR-218b

Accession MIMAT0020589
Sequence

11 -  

uugugcuugaucuaaccaugug

 - 32

Get sequence
Deep sequencing141 reads, 13 experiments
Evidence experimental; Illumina [1]

References

1
PMID:21312241 "MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing" Li G, Li Y, Li X, Ning X, Li M, Yang G J Cell Biochem. 112:1318-1328(2011).