miRBase entry: ssc-mir-190b

Stem-loop ssc-mir-190b


Accession
MI0017988
Description
Sus scrofa ssc-mir-190b precursor miRNA
Gene family
MIPF0000076; mir-190


Sequence

7 reads, 27 reads per million, 4 experiments
ugcuucugugUGAUAUGUUUGAUAUUGGGUUGuuuaauuaggaaccaacuaaaugucaaacauauucuuacagcaguaggcaa
((((((((((((((((((((((((((.((((((((......))).))))).)))))))))))))))...))).))).))))).

Structure
-     -   -   ---               G     -   aa 
 ugcuu cug ugU   GAUAUGUUUGAUAUU GGUUG uuu  u
 ||||| ||| |||   ||||||||||||||| ||||| |||   
 acgga gac aca   uuauacaaacuguaa ucaac aag  u
a     u   g   uuc               a     c   ga 


Annotation confidence Not enough data
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Genome context
chr4: 104457810-104457892 [+]

Database links

Mature ssc-miR-190b

Accession MIMAT0020588
Description Sus scrofa ssc-miR-190b mature miRNA
Sequence 11 - UGAUAUGUUUGAUAUUGGGUUG - 32
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328

  2. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100