miRBase entry: ssc-mir-187

Stem-loop ssc-mir-187


Accession
MI0017987
Description
Sus scrofa ssc-mir-187 precursor miRNA
Gene family
MIPF0000078; mir-187

Literature search
2 open access papers mention ssc-mir-187
(2 sentences)

Sequence

ugagaccucgggcuacaacacgggacucgggcgcugcucugaccccUCGUGUCUUGUGUUGCAGCCGGagggacgcag
.....((((.((((.(((((((((((.((((.((......).).)).)).))))))))))).)))).)))).......

Structure
--ugaga    g    a           u  -  c - ug 
       ccuc ggcu caacacgggac cg gg g c  c
       |||| |||| ||||||||||| || || | |   
       ggaG CCGA GUUGUGUUCUG GC cc c g  u
gacgcag    G    C           U  U  c a uc 


Annotation confidence Not enough data
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Genome context
chr6: 112191797-112191874 [-]

Database links

Mature ssc-miR-187

Accession MIMAT0020587
Description Sus scrofa ssc-miR-187 mature miRNA
Sequence 47 - UCGUGUCUUGUGUUGCAGCCGG - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328