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miRBase |
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Stem-loop sequence osa-MIR5080 |
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Accession | MI0017970 (change log) | ||||
Description | Oryza sativa miR5080 stem-loop | ||||
Literature search |
1 open access papers mention osa-MIR5080 | ||||
Stem-loop |
acacac - - - a ac aagaaacgugag 5' auac cug ca gg gugguu uuug u |||| ||| || || |||||| |||| u 3' uaug gac gu cc uacuag aaac c -acuuc a a g a ga gaaguuacagga |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Comments |
This is a predicted homolog of a miRNA identified by Illumina deep sequencing in barley (Hordeum vulgare) [1]. |
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Genome context |
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Database links |
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Mature sequence osa-miR5080 |
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Accession | MIMAT0020579 |
Sequence |
59 - aaaaggaucauaccgugacag - 79 |
Deep sequencing | 4 reads, 2 experiments |
Evidence | not experimental |
References |
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1 |
PMID:21352554
"Discovery of barley miRNAs through deep sequencing of short reads"
BMC Genomics. 12:129(2011).
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