miRBase entry: gma-MIR5032

Stem-loop gma-MIR5032


Accession
MI0017903
Description
Glycine max gma-MIR5032 precursor miRNA


Sequence

gacaccaaagauagggauauuaaacgaauggaauuaguauauggauguaauauaaugaaauAGAGCCACUUUUGGGUUCCCUAUgaaaugaggcauagaaaggagccacugugaagaaguuuuacgaguuacgaaggaaacuucgaguuca
.((((((....(((...((((.....))))...))).....))).)))............((((((..((((..(((((((((((........)))))...)))))).....))))..)))))).(((((.(((((....)))))))))).

Structure
gacaccaaagauagggauauuaaacgaauggaauuaguauauggauguaauauaaugaaa      CA    ---UG      ---     aaa 
                                                            uAGAGC  CUUU     GGUUCC   CUAUg   u
                                                            ||||||  ||||     ||||||   |||||    
                                                            auuuug  gaag     ccgagg   gauac   g
---------------------------------acuugagcuucaaaggaagcauugagc      aa    uguca      aaa     gga 


Annotation confidence Not enough data
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Genome context
chr2: 35292552-35292702 [-]

Database links

Mature gma-miR5032

Accession MIMAT0021052
Description Glycine max gma-miR5032 mature miRNA
Sequence 62 - AGAGCCACUUUUGGGUUCCCUAU - 84
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 21751852
    Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome
    "Radwan O, Liu Y, Clough SJ"
    "Mol Plant Microbe Interact (2011) 24:958-972