miRBase entry: hsa-mir-5008

Stem-loop hsa-mir-5008


Accession
MI0017876
Symbol
HGNC: MIR5008
Description
Homo sapiens hsa-mir-5008 precursor miRNA

Literature search
1 open access papers mention hsa-mir-5008
(2 sentences)

Sequence

112 reads, 28 reads per million, 32 experiments
gggcugaccccuagggucaggUGAGGCCCUUGGGGCACAGUGGugccaucuccCCUGUGCUCCCAGGGCCUCGCcugucccuugaggucggccc
(((((((((.(.((((.(((((((((((((.(((((((((.((........)).))))))))).))))))))))))).)))).).)))))))))

Structure
         c u    u             U         U  ugc 
gggcugacc c aggg caggUGAGGCCCU GGGGCACAG GG   c
||||||||| | |||| ||||||||||||| ||||||||| ||    
cccggcugg g uccc gucCGCUCCGGGA CCUCGUGUC cc   a
         a u    u             C         C  ucu 


Annotation confidence Not enough data
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Genome context
chr1: 227941590-227941683 [-]

Database links

Mature hsa-miR-5008-5p

Accession MIMAT0021039
Description Homo sapiens hsa-miR-5008-5p mature miRNA
Sequence 22 - UGAGGCCCUUGGGGCACAGUGG - 43
Evidence not_experimental

Mature hsa-miR-5008-3p

Accession MIMAT0021040
Description Homo sapiens hsa-miR-5008-3p mature miRNA
Sequence 54 - CCUGUGCUCCCAGGGCCUCGC - 74
Evidence not_experimental

References

  1. PubMed ID: 21558790
    Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis
    "Hansen TB, Kjems J, Bramsen JB"
    "RNA Biol (2011) 8:378-383