Stem-loop bfl-mir-4904

Accession

MI0017681

Description

Branchiostoma floridae bfl-mir-4904 precursor miRNA

Gene family

MIPF0001786; mir-4904

Sequence

cccuggcucggUCCCGGAGUCGUUCUAUACGCcguuuguacuugauaaaauGGCGUAGAGCGACUAAGGAACCaggaca
.(((((.....(((...(((((((((..(((((((((..........))))))))))))))))))..))).)))))...

Structure

--c     cucgg   CGG         AU         guac 
   ccugg     UCC   AGUCGUUCU  ACGCcguuu    u
   |||||     |||   |||||||||  |||||||||     
   ggaCC     AGG   UCAGCGAGA  UGCGGuaaa    u
aca     ----A   -AA         --         auag 

Annotation confidence Not enough data

Genome context

GG666662.1: 974636-974714 [+]

Mature bfl-miR-4904-5p

• Accession: MIMAT0020499
• Description: Branchiostoma floridae bfl-miR-4904-5p mature miRNA
• Sequence: 12 - UCCCGGAGUCGUUCUAUACGC - 32
• Evidence: experimental ; 454 [1]

Mature bfl-miR-4904-3p

• Accession: MIMAT0020500
• Description: Branchiostoma floridae bfl-miR-4904-3p mature miRNA
• Sequence: 52 - GGCGUAGAGCGACUAAGGAACC - 73
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27