Stem-loop bfl-mir-34e

Accession

MI0017679

Description

Branchiostoma floridae bfl-mir-34e precursor miRNA

Gene family

MIPF0000039; mir-34

Sequence

cgagcccgccaguuUGGCAGUGCGCGCCUACAGCUGAcccgguaugaccucacgggccacuguacacacucccagccgggcgggccaa
...(((((((.(.((((.((((.(....(((((.((.((((...........)))).)))))))).)))).)))).).)))))))...

Structure

cga       a u    C    C CGCC     C  A    guau 
   gcccgcc g uUGG AGUG G    UACAG UG cccg    g
   ||||||| | |||| |||| |    ||||| || ||||    a
   cgggcgg c gacc ucac c    auguc ac gggc    c
aac       g c    c    a ----     -  c    acuc 

Annotation confidence Not enough data

Genome context

GG666704.1: 337119-337206 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-34e

Mature bfl-miR-34e

• Accession: MIMAT0020497
• Description: Branchiostoma floridae bfl-miR-34e mature miRNA
• Sequence: 15 - UGGCAGUGCGCGCCUACAGCUGA - 37
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27