Stem-loop sequence bfl-mir-34d

AccessionMI0017678 (change log)
DescriptionBranchiostoma floridae miR-34d stem-loop
Gene family MIPF0000039; mir-34
Stem-loop 
   cca       a u    c      cgcc     c  a    guau 
5'    gcccgcc g uugg agugug    uacag ug cccg    g
      ||||||| | |||| ||||||    ||||| || ||||    a
3'    ugggcgg c gacc ucacac    auguc ac gggc    c
   aac       g c    c      ----     -  c    acuc
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (JGI2; GCF_000003815.1) Overlapping transcripts
GG666685.1: 1086839-1086926 [-]
intergenic
Clustered miRNAs
< 10kb from bfl-mir-34d
bfl-mir-34c-1GG666685.1: 1088499-1088590 [-]
bfl-mir-34aGG666685.1: 1087742-1087842 [-]
bfl-mir-34dGG666685.1: 1086839-1086926 [-]
Database links

Mature sequence bfl-miR-34d

Accession MIMAT0020496
Sequence

15 -  

uggcagugugcgccuacagcuga

 - 37

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Evidence experimental; 454 [1]

References

1
PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).