Stem-loop bfl-mir-34d

Accession

MI0017678

Description

Branchiostoma floridae bfl-mir-34d precursor miRNA

Gene family

MIPF0000039; mir-34

Sequence

ccagcccgccaguuUGGCAGUGUGCGCCUACAGCUGAcccgguaugaccucacgggccacuguacacacucccagccgggcgggucaa
...(((((((.(.((((.((((((....(((((.((.((((...........)))).))))))))))))).)))).).)))))))...

Structure

cca       a u    C      CGCC     C  A    guau 
   gcccgcc g uUGG AGUGUG    UACAG UG cccg    g
   ||||||| | |||| ||||||    ||||| || ||||    a
   ugggcgg c gacc ucacac    auguc ac gggc    c
aac       g c    c      ----     -  c    acuc 

Annotation confidence Not enough data

Genome context

GG666685.1: 1086839-1086926 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from bfl-mir-34d

Mature bfl-miR-34d

• Accession: MIMAT0020496
• Description: Branchiostoma floridae bfl-miR-34d mature miRNA
• Sequence: 15 - UGGCAGUGUGCGCCUACAGCUGA - 37
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27