Stem-loop bfl-mir-4900a-1

Accession

MI0017674

Description

Branchiostoma floridae bfl-mir-4900a-1 precursor miRNA

Gene family

MIPF0001224; mir-4900

Sequence

gcuaagaguuuuucuuccuuggcacagcucugugacaguggaacaUAGCUGGCUGGCGAAGAAAUGCccuucca
...(((.((.(((((((.(((((.(((((.(((..(...)..))).)))))))))).))))))).)).)))...

Structure

gcu   a  u       c     a     c   ga a 
   aag gu uuucuuc uuggc cagcu ugu  c  
   ||| || ||||||| ||||| ||||| |||  | g
   uuc CG AAAGAAG GGUCG GUCGA aca  g  
acc   c  U       C     -     U   ag u 

Annotation confidence Not enough data

Genome context

GG666468.1: 2410817-2410890 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from bfl-mir-4900a-1

Mature bfl-miR-4900a

• Accession: MIMAT0020492
• Description: Branchiostoma floridae bfl-miR-4900a mature miRNA
• Sequence: 46 - UAGCUGGCUGGCGAAGAAAUGC - 67
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27