Stem-loop sequence bfl-mir-4890

AccessionMI0017662 (change log)
DescriptionBranchiostoma floridae miR-4890 stem-loop
Gene family MIPF0001703; mir-4890
Stem-loop 
   cuc     ag                aa  u     a  -  a     
5'    ugugc  uucuaugugauuagcu  gg agcug ua cc uggc 
      |||||  ||||||||||||||||  || ||||| || || ||| a
3'    acacg  aagguauacuagucga  cc ucgac au gg accg 
   cga     -g                ga  -     c  c  -
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (JGI2; GCF_000003815.1) Overlapping transcripts
GG666603.1: 5823503-5823593 [-]
intergenic
Clustered miRNAs
< 10kb from bfl-mir-4890
bfl-mir-71GG666603.1: 5824839-5824939 [-]
bfl-mir-4890GG666603.1: 5823503-5823593 [-]
Database links

Mature sequence bfl-miR-4890

Accession MIMAT0020479
Sequence

17 -  

gugauuagcuaagguagcugaua

 - 39

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Evidence experimental; 454 [1]

References

1
PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).