miRBase entry: bfl-mir-4889a

Stem-loop bfl-mir-4889a


Accession
MI0017659
Description
Branchiostoma floridae bfl-mir-4889a precursor miRNA
Gene family
MIPF0001686; mir-4889


Sequence

uuggccugucucuuuuuaacccucccagugccaugggcugauuuuauagcuuacuucuaaUCGGCCCUGGUGUUUGGUGGGUUaauaacagaccagguaa
...((((((((.((.(((((((..((((.((((.(((((((((....((....))...)))))))))))))..)))).))))))).)).))).)))))..

Structure
uug     -   c  u       uc    -u    u         uuau  c 
   gccug ucu uu uuaaccc  ccag  gcca gggcugauu    ag u
   ||||| ||| || |||||||  ||||  |||| |||||||||    ||  
   uggac aga aa aaUUGGG  GGUU  UGGU CCCGGCUaa    uc u
-aa     c   c  u       -U    UG    -         -ucu  a 


Annotation confidence Not enough data
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Genome context
GG666498.1: 376033-376132 [+]

Database links

Mature bfl-miR-4889a

Accession MIMAT0020476
Description Branchiostoma floridae bfl-miR-4889a mature miRNA
Sequence 61 - UCGGCCCUGGUGUUUGGUGGGUU - 83
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27