Stem-loop bfl-mir-4879

Accession

MI0017645

Description

Branchiostoma floridae bfl-mir-4879 precursor miRNA

Gene family

MIPF0001780; mir-4879

Sequence

uccagauguUAAACUAUCGUUCUGGGAACAGucgcucuuacaagcuguucccauggagauagcuuagcaacuccu
...((.((((((.(((((.(((((((((((((...........)))))))))).)))))))).)))))).))...

Structure

ucc  a      A     G   -          cgcu 
   ag uguUAA CUAUC UUC UGGGAACAGu    c
   || |||||| ||||| ||| ||||||||||    u
   uc acgauu gauag agg acccuugucg    u
ucc  a      c     -   u          aaca 

Annotation confidence Not enough data

Genome context

GG666659.1: 638061-638135 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-4879

Mature bfl-miR-4879

• Accession: MIMAT0020462
• Description: Branchiostoma floridae bfl-miR-4879 mature miRNA
• Sequence: 10 - UAAACUAUCGUUCUGGGAACAG - 31
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27