miRBase entry: bfl-mir-4877

Stem-loop bfl-mir-4877


Accession
MI0017643
Description
Branchiostoma floridae bfl-mir-4877 precursor miRNA
Gene family
MIPF0001814; mir-4877


Sequence

cucccucugcgauggggguaguuucuccacuacuucagugcuguggugggugaAGUAGUAGUUGAACUAUCUUCUucacaguggcuc
...((.(((.((.(((((((((((..(.(((((((((.(.(......).)))))))))).)..))))))))))).)).))).))...

Structure
cuc  u   c  u           cu c         g g ug 
   cc cug ga ggggguaguuu  c acuacuuca u c  u
   || ||| || |||||||||||  | ||||||||| | |   
   gg gac cu CUUCUAUCAAG  G UGAUGAagu g g  g
cuc  u   a  U           UU A         - g ug 


Annotation confidence Not enough data
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Genome context
GG666659.1: 637270-637356 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bfl-mir-4877
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bfl-miR-4877

Accession MIMAT0020460
Description Branchiostoma floridae bfl-miR-4877 mature miRNA
Sequence 54 - AGUAGUAGUUGAACUAUCUUCU - 75
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27