Stem-loop sequence bfl-mir-4875c

Accession

MI0017640 (change log)

Description

Branchiostoma floridae miR-4875c stem-loop

Stem-loop

   -g     g    -        g    a   gcggccgg  g 
5'   uuuuu ucgg cuuucuau uugu ccg        cg a
     ||||| |||| |||||||| |||| |||        ||  
3'   ggaaa agcc gaaagaua aaca ggc        gu u
   gu     g    c        a    c   -aaaagaa  a 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JGI2; GCF_000003815.1): GG666627.1: 748149-748229 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0017640

Mature sequence bfl-miR-4875c-3p

• Accession: MIMAT0020457
• Sequence: 55 - cacaaaauagaaagcccgaga - 75
• Evidence: experimental; 454 [1]

References

1. PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).