Stem-loop sequence bfl-mir-34c-1

AccessionMI0017635 (change log)
Previous IDsbfl-mir-34c
DescriptionBranchiostoma floridae miR-34c-1 stem-loop
Gene family MIPF0000039; mir-34
Stem-loop 
   acc      ag  aucu          u   cu    gcu       
5'    ucgugc  cc    ggcaguguug uag  ggcc   aggagu 
      ||||||  ||    |||||||||| |||  ||||   ||||| c
3'    agcgcg  gg    ccgucgcaac auc  ccgg   uucucg 
   cac      aa  cauc          u   uc    -au
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (JGI2; GCF_000003815.1) Overlapping transcripts
GG666685.1: 1088499-1088590 [-]
intergenic
Clustered miRNAs
< 10kb from bfl-mir-34c-1
bfl-mir-34c-1GG666685.1: 1088499-1088590 [-]
bfl-mir-34aGG666685.1: 1087742-1087842 [-]
bfl-mir-34dGG666685.1: 1086839-1086926 [-]
Database links

Mature sequence bfl-miR-34c

Accession MIMAT0020451
Sequence

57 -  

gcccucuaucaacgcugcccua

 - 78

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Evidence experimental; 454 [1]

References

1
PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).