Stem-loop bfl-mir-4872c-1

Accession

MI0017632

Description

Branchiostoma floridae bfl-mir-4872c-1 precursor miRNA

Gene family

MIPF0001205; mir-4872

Sequence

gguucacaaguggUGUCAGGACGACAAAAGCUCUGAguccucucaacaccagaguuuuguugccccgacuccuuuugugguca
...(((((((.((.(((.((.((((((((.(((((.((.........))))))))))))))).)).))).)).)))))))...

Structure

ggu       u  U   A  A        G     A  ccu 
   ucacaag gg GUC GG CGACAAAA CUCUG gu   c
   ||||||| || ||| || |||||||| ||||| ||   u
   gguguuu cc cag cc guuguuuu gagac ca   c
acu       u  u   c  c        -     -  caa 

Annotation confidence Not enough data

Genome context

GG666674.1: 876573-876655 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-4872c-1

Mature bfl-miR-4872c

• Accession: MIMAT0020116
• Description: Branchiostoma floridae bfl-miR-4872c mature miRNA
• Sequence: 14 - UGUCAGGACGACAAAAGCUCUGA - 36
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27