Stem-loop sequence bfl-mir-4872a

AccessionMI0017630 (change log)
DescriptionBranchiostoma floridae miR-4872a stem-loop
Gene family MIPF0001205; mir-4872
Stem-loop 
   cua     a    ca u      aua             -  uc 
5'    gguuc caug  g gccggg   acuaaaacucuga gu  u
      ||||| ||||  | ||||||   ||||||||||||| ||  g
3'    ucaag guau  c cggccc   ugguuuugagacu ca  u
   uca     -    ac u      -ca             u  uu
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (JGI2; GCF_000003815.1) Overlapping transcripts
GG666674.1: 862903-862990 [-]
intergenic
Clustered miRNAs
< 10kb from bfl-mir-4872a
bfl-mir-4872aGG666674.1: 862903-862990 [-]
bfl-mir-4894GG666674.1: 862728-862820 [-]
Database links

Mature sequence bfl-miR-4872a

Accession MIMAT0020114
Sequence

17 -  

ugccgggauaacuaaaacucuga

 - 39

Get sequence
Evidence experimental; 454 [1]

References

1
PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).