miRBase entry: bfl-mir-4871

Stem-loop bfl-mir-4871


Accession
MI0017629
Description
Branchiostoma floridae bfl-mir-4871 precursor miRNA


Sequence

ugaacUCUGAAGUACCUGUUGCCAAAGGcgcucauagugacaaaccUUUGGCACUGGUACUUUGGAGUaaaga
...(((((((((((((.((.((((((((((((...)))).....)))))))))).))))))))))))).....

Structure
--uga             U  U        -----    c 
     acUCUGAAGUACC GU GCCAAAGG     cgcu  
     ||||||||||||| || ||||||||     |||| a
     UGAGGUUUCAUGG CA CGGUUUcc     guga  
agaaa             U  -        aaaca    u 


Annotation confidence Not enough data
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Genome context
GG666543.1: 1679942-1680014 [-]

Database links

Mature bfl-miR-4871-5p

Accession MIMAT0020112
Description Branchiostoma floridae bfl-miR-4871-5p mature miRNA
Sequence 6 - UCUGAAGUACCUGUUGCCAAAGG - 28
Evidence experimental
454 [1]

Mature bfl-miR-4871-3p

Accession MIMAT0020113
Description Branchiostoma floridae bfl-miR-4871-3p mature miRNA
Sequence 47 - UUUGGCACUGGUACUUUGGAGU - 68
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27