Stem-loop bfl-mir-4868c

Accession

MI0017625

Description

Branchiostoma floridae bfl-mir-4868c precursor miRNA

Gene family

MIPF0001233; mir-4868

Sequence

cugcucaugucaguaCUGGUGAGUCUGGAUGCUGAUGauauguuaguucccaUCAGCUCCAAGGCUGAUCAGuagugaugugagauc
...(((((((((.(((((((.((((((((.(((((((.............)))))))))).))))).))))))).)))))))))...

Structure

cug         g       G     -   U       auaug 
   cucauguca uaCUGGU AGUCU GGA GCUGAUG     u
   ||||||||| ||||||| ||||| ||| |||||||     u
   gaguguagu auGACUA UCGGA CCU CGACUac     a
cua         g       G     A   -       ccuug 

Annotation confidence Not enough data

Genome context

GG666459.1: 709094-709180 [-]

Mature bfl-miR-4868c-5p

• Accession: MIMAT0020106
• Description: Branchiostoma floridae bfl-miR-4868c-5p mature miRNA
• Sequence: 16 - CUGGUGAGUCUGGAUGCUGAUG - 37
• Evidence: experimental ; 454 [1]

Mature bfl-miR-4868c-3p

• Accession: MIMAT0020107
• Description: Branchiostoma floridae bfl-miR-4868c-3p mature miRNA
• Sequence: 53 - UCAGCUCCAAGGCUGAUCAG - 72
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27