Stem-loop sequence bfl-mir-4865

AccessionMI0017620 (change log)
DescriptionBranchiostoma floridae miR-4865 stem-loop
Gene family MIPF0001750; mir-4865
Stem-loop 
   -gu     c            uc aa      ----cu    u 
5'    gccug uggcuugucacu  c  uacaug      gugg c
      ||||| ||||||||||||  |  ||||||      |||| c
3'    cgggc guuggacaguga  g  auguac      uacc c
   cuc     u            ga ag      cugccc    a
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (JGI2; GCF_000003815.1) Overlapping transcripts
GG666538.1: 1824327-1824410 [-]
intergenic
Clustered miRNAs
< 10kb from bfl-mir-4865
bfl-mir-4865GG666538.1: 1824327-1824410 [-]
bfl-mir-4860GG666538.1: 1823456-1823529 [-]
Database links

Mature sequence bfl-miR-4865-5p

Accession MIMAT0020099
Previous IDsbfl-miR-4865*
Sequence

11 -  

gcuugucacuuccaauacaugc

 - 32

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Evidence experimental; 454 [1]

Mature sequence bfl-miR-4865-3p

Accession MIMAT0020100
Previous IDsbfl-miR-4865
Sequence

55 -  

uguagagagagugacagguugu

 - 76

Get sequence
Evidence experimental; 454 [1]

References

1
PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).