miRNA Entry for MI0017615

Stem-loop sequence bfl-mir-4862

Accession

Previous IDs

bfl-mir-4862a

Description

Branchiostoma floridae miR-4862 stem-loop

Stem-loop

   c     a  c           cg     cuacu 
5'  ugauc cg guuuaugucug  ccugu     g
    ||||| || |||||||||||  |||||      
3'  auuag gc caaauacggac  ggaca     u
   u     a  u           au     caaau

Get sequence

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

Coordinates (JGI2; GCF_000003815.1)	Overlapping transcripts
GG666534.1: 218827-218894 [+]	intergenic

Clustered miRNAs

< 10kb from bfl-mir-4862
bfl-mir-4869	GG666534.1: 216744-216826 [+]
bfl-mir-4857	GG666534.1: 217921-217998 [+]
bfl-mir-4862	GG666534.1: 218827-218894 [+]
bfl-mir-4856b	GG666534.1: 219709-219795 [+]
bfl-mir-4856a	GG666534.1: 220264-220351 [+]

Database links

miRBase Tracker:MI0017615

Mature sequence bfl-miR-4862-5p
Accession	MIMAT0020091
Previous IDs	bfl-miR-4862a
Sequence	7 - acgcguuuaugucugcgccugu - 28 Get sequence
Evidence	experimental; 454 [1]

Minor miR* sequence bfl-miR-4862b*
Accession	MIMAT0020092
Sequence	43 - agguacaggcauaaacucgaga - 64 Get sequence
Evidence	experimental;

References
1	PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).

miRBase

Stem-loop sequence bfl-mir-4862

Mature sequence bfl-miR-4862-5p

Minor miR* sequence bfl-miR-4862b*

References