miRBase entry: bfl-mir-4856a

Stem-loop bfl-mir-4856a


Accession
MI0017609
Description
Branchiostoma floridae bfl-mir-4856a precursor miRNA
Gene family
MIPF0001847; mir-4856


Sequence

agagguaucuuuauuACGCAGUGACGUCAGCGCCUCUugucauacaccacagaggugaugacgucacugaugacaugaagaugcuacc
...(((((((((((..(((((((((((((.(((((((.((........))))))))).))))))))))).))..)))))))))))...

Structure
aga           uA  -           G       u  cau 
   gguaucuuuau  CG CAGUGACGUCA CGCCUCU gu   a
   |||||||||||  || ||||||||||| ||||||| ||    
   ucguagaagua  gu gucacugcagu guggaga ca   c
cca           ca  a           a       -  cca 


Annotation confidence Not enough data
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Genome context
GG666534.1: 220264-220351 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from bfl-mir-4856a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bfl-miR-4856a

Accession MIMAT0020082
Description Branchiostoma floridae bfl-miR-4856a mature miRNA
Sequence 16 - ACGCAGUGACGUCAGCGCCUCU - 37
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27