miRBase entry: spu-mir-4854

Stem-loop spu-mir-4854


Accession
MI0017604
Description
Strongylocentrotus purpuratus spu-mir-4854 precursor miRNA
Gene family
MIPF0001908; mir-4854


Sequence

aagggcgauuuggggcuugacgucggcacuguaacauggcuuuugucauucauaacaaUGUUGCAGUGACGACUUCGCGCucccgauggccaau
...(((.(((.(((((.(((.((((.((((((((((((((....))))..........)))))))))).)))).))).))))).))).)))...

Structure
aag   g   u     u   c    g          ----------    u 
   ggc auu ggggc uga gucg cacuguaaca          uggc u
   ||| ||| ||||| ||| |||| ||||||||||          ||||  
   ccg uag ccuCG GCU CAGC GUGACGUUGU          acug u
uaa   g   c     C   U    A          aacaauacuu    u 


Annotation confidence Not enough data
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Genome context
KN916317.1: 403415-403508 [+]

Database links

Mature spu-miR-4854

Accession MIMAT0020077
Description Strongylocentrotus purpuratus spu-miR-4854 mature miRNA
Sequence 59 - UGUUGCAGUGACGACUUCGCGC - 80
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27